STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10335631340S ribosomal protein S27. (91 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSSPAP00000016519
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.996
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.995
rps28
Ribosomal protein S28.
   
 0.995
rps10
Ribosomal protein S10.
   
 0.995
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.995
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.995
rps16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.995
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.995
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.995
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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