STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000004321Oligodendrocyte transcription factor 1. (259 aa)    
Predicted Functional Partners:
id4
Inhibitor of DNA binding 4.
    
 
 0.614
LOC103359019
NK2 homeobox 2a.
   
 0.604
LOC103364680
NK2 homeobox 2b.
   
 0.604
sox10
SRY-box transcription factor 10.
   
 
 0.579
gart
Phosphoribosylglycinamide formyltransferase.
   
  
 0.473
LOC103372573
Hairy-related 12.
    
 0.469
NKX2-8
NK2 homeobox 8.
   
 0.456
LOC103366710
Hes family bHLH transcription factor 6.
    
 0.409
LOC103373083
Hairy-related 13.
    
 0.409
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.