STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000004344Si:ch211-272n13.3. (315 aa)    
Predicted Functional Partners:
ENSSPAP00000004315
Uncharacterized protein.
 
 
  0.938
birc6
Baculoviral IAP repeat containing 6.
   
 0.720
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.680
LOC103364924
Rho family GTPase 2.
   
  0.652
LOC103368749
Rho family GTPase 2.
   
  0.652
rela
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.640
REL
REL proto-oncogene, NF-kB subunit.
   
 0.640
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.640
trip12
Thyroid hormone receptor interactor 12.
   
 0.639
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
  0.637
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.