STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAG1PEAK1 related, kinase-activating pseudokinase 1. (1358 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
     
 0.681
ENSSPAP00000031427
Uncharacterized protein.
     
 0.681
ENSSPAP00000031428
Uncharacterized protein.
     
 0.681
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.575
ENSSPAP00000029958
Uncharacterized protein.
     
 0.534
itsn1
Intersectin 1 (SH3 domain protein).
     
 0.534
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
      
 0.524
setbp1
SET binding protein 1.
  
    0.517
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.489
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
      
 0.482
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.