STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362787Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)    
Predicted Functional Partners:
LOC103362717
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.989
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.989
LOC103360495
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.979
LOC103367853
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.976
GNB4
G protein subunit beta 4.
   
 0.974
LOC103370085
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.974
GNB5
G protein subunit beta 5.
   
 0.965
LOC103368437
Rhodopsin.
   
 0.943
LOC103375278
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.940
RHO
Rhodopsin.
   
 0.939
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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