STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375185Heme-binding protein soul5, like. (355 aa)    
Predicted Functional Partners:
pef1
Penta-EF-hand domain containing 1.
    
   0.639
pdcd6
Programmed cell death 6.
    
   0.639
LOC103365897
BH4_2 domain-containing protein.
   
   0.625
bcl2l1
BCL2 like 1.
   
   0.624
LOC103353844
Uncharacterized protein.
    
   0.400
LOC103375696
BCL2 like 10.
    
   0.400
LOC103369030
MCL1 apoptosis regulator, BCL2 family member b.
    
   0.400
LOC103360102
BCL2 family apoptosis regulator BOK b.
    
   0.400
LOC103371250
Uncharacterized protein.
    
   0.400
bax
BCL2 associated X, apoptosis regulator a.
    
   0.400
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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