STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTC1CREB regulated transcription coactivator 1b. (420 aa)    
Predicted Functional Partners:
atf1
Activating transcription factor 1.
    
 0.670
CREB1
cAMP responsive element binding protein 1.
    
 0.670
ENSSPAP00000007930
BZIP domain-containing protein.
    
 0.670
LOC103371210
cAMP responsive element modulator a.
    
 0.670
LOC103353109
BZIP domain-containing protein.
    
 0.670
creb1
Uncharacterized protein.
    
 0.670
ENSSPAP00000006187
TORC_C domain-containing protein.
 
   
 
0.663
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.643
atf6b
BZIP domain-containing protein.
    
 0.618
atf6
Activating transcription factor 6.
    
 0.618
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.