STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373403Cytoglobin 2; Belongs to the globin family. (178 aa)    
Predicted Functional Partners:
LOC103355652
Cytochrome b5 reductase 4.
   
 0.755
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.555
ENSSPAP00000010022
Uncharacterized protein.
   
  
 0.510
ngb
Neuroglobin; Belongs to the globin family.
      
 0.499
ENSSPAP00000009846
Peptidase S1 domain-containing protein.
    
 0.498
ENSSPAP00000008117
Uncharacterized protein.
    
 0.497
hgfac
HGF activator.
    
 0.497
ENSSPAP00000025007
Uncharacterized protein.
    
 0.497
ENSSPAP00000025109
Hyaluronan binding protein 2.
    
 0.497
LOC103353989
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.476
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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