STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcd3Phosphoinositide phospholipase C. (790 aa)    
Predicted Functional Partners:
ipmk
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.924
LOC103357656
Inositol polyphosphate-5-phosphatase L.
   
 
 0.907
itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
   
 
 0.906
LOC103376586
Inositol 1,4,5-trisphosphate receptor, type 1a.
   
 
 0.903
LOC103355429
Inositol 1,4,5-trisphosphate receptor, type 1b.
   
 
 0.903
prkcb
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.902
LOC103364666
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.902
mtm1
Myotubularin 1.
     
 0.898
dgki
Diacylglycerol kinase.
   
 0.876
LOC103376565
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
   
 0.869
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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