STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCTEX1D1Tctex1 domain containing 1. (176 aa)    
Predicted Functional Partners:
dynlrb1
Dynein light chain roadblock.
   
 0.868
DYNLRB2
Dynein light chain roadblock.
   
 0.868
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
   
 0.848
dnal4
Dynein light chain.
    
 0.834
wdr60
WD repeat domain 60.
    
 0.826
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.802
DYNLT3
Dynein, light chain, Tctex-type 3.
    
 
 0.798
LOC103372493
Uncharacterized protein.
    
 
 0.798
LOC103359517
Dynein light chain.
    
 0.794
LOC103365144
Dynein light chain.
    
 0.794
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.