STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (618 aa)    
Predicted Functional Partners:
zfc3h1
Uncharacterized protein.
    
 
 0.727
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
  
   
 0.633
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
  
   
 0.589
cnot8
CCR4-NOT transcription complex, subunit 8.
    
 
 0.562
LOC103366853
CCR4-NOT transcription complex, subunit 7.
    
 
 0.562
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.562
ube2z
Ubiquitin-conjugating enzyme E2Z.
   
    0.558
wtap
WT1 associated protein.
   
  
 0.547
virma
Vir like m6A methyltransferase associated.
    
 
 0.544
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
  
 0.508
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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