STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103361626Uncharacterized protein. (1801 aa)    
Predicted Functional Partners:
gpsm2
Uncharacterized protein.
    
 
 0.856
ENSSPAP00000004731
TPR_REGION domain-containing protein.
    
 
 0.563
LOC103370537
Uncharacterized protein.
    
 
 0.547
LOC103376269
TPR_REGION domain-containing protein.
    
 
 0.547
znf518b
Uncharacterized protein.
  
   
 0.500
pbxip1
Pre-B-cell leukemia homeobox interacting protein 1b.
  
   
 0.495
ENSSPAP00000011035
Solute carrier family 25 member 51b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.487
LOC103353696
BHLH domain-containing protein.
  
     0.472
LOC103370720
Germ cell nuclear acidic peptidase.
   
  
 0.465
mdc1
Uncharacterized protein.
  
     0.450
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.