STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
birc7Baculoviral IAP repeat containing 7. (375 aa)    
Predicted Functional Partners:
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.984
tradd
Tnfrsf1a-associated via death domain.
   
 0.984
xiap
X-linked inhibitor of apoptosis.
   
 0.984
LOC103365293
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.984
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.979
LOC103374293
Baculoviral IAP repeat containing 5a.
    
 0.977
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.966
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.963
ENSSPAP00000005072
Protein kinase domain-containing protein.
   
 0.955
map3k7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.955
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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