STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxb7Homeobox B7a. (220 aa)    
Predicted Functional Partners:
LOC103365503
Homeobox domain-containing protein.
  
 
0.975
ENSSPAP00000002460
Homeobox B6b.
   
 
0.974
LOC103365501
Homeobox domain-containing protein.
  
 
0.933
LOC103354411
Homeobox B5b.
   
 
0.930
HOXA7
Homeobox A7.
  
  
0.909
hoxc6
Homeobox C6a.
   
 
0.887
hoxd4
Homeobox D4a.
   
 
0.863
hoxb4
Homeobox B4a.
  
 
0.849
hoxc5
Homeobox C5a.
   
  
0.783
ENSSPAP00000003208
NR LBD domain-containing protein.
    
 0.764
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.