STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp3GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (516 aa)    
Predicted Functional Partners:
mto1
Mitochondrial tRNA translation optimization 1.
 0.993
ergic3
ERGIC and golgi 3.
  
 0.979
LOC103375251
ERGIC and golgi 2.
  
 0.979
ergic1
Endoplasmic reticulum-golgi intermediate compartment 1.
  
 0.979
ENSSPAP00000027309
COPIIcoated_ERV domain-containing protein.
  
 0.979
LOC103376186
Uncharacterized protein.
  
 0.979
gtpbp8
GTP binding protein 8 (putative).
   
 
 0.971
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.959
mrm3
Mitochondrial rRNA methyltransferase 3a.
   
 
 0.959
mrpl13
Mitochondrial ribosomal protein L13.
  
 
 0.958
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.