STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356497Adhesion G protein-coupled receptor B1b; Belongs to the G-protein coupled receptor 2 family. (1114 aa)    
Predicted Functional Partners:
ranbp2
RAN binding protein 2.
   
 0.991
ENSSPAP00000005959
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.957
kpnb1
Karyopherin (importin) beta 1.
   
 0.957
nup153
Nucleoporin 153.
    
 0.926
rangap1
RAN GTPase activating protein 1a.
   
 0.907
LOC103371565
Ran GTPase activating protein 1b.
   
 0.907
nup50
Nucleoporin 50.
   
 0.855
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
 
 0.853
ENSSPAP00000019057
RAN guanine nucleotide release factor.
    
 
 0.842
NUP214
Nucleoporin 214.
    
 0.823
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.