STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dus2Dihydrouridine synthase 2. (504 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.993
brix1
Brix domain containing 2.
   
    0.809
thumpd1
THUMP domain containing 1.
  
 
 0.776
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.758
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
  
    0.756
utp3
UTP3 small subunit processome component.
   
    0.755
dus1l
Dihydrouridine synthase 1-like (S. cerevisiae).
   
  
0.751
lsg1
Large 60S subunit nuclear export GTPase 1.
   
    0.745
nsun5
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.740
pus3
Pseudouridylate synthase 3.
  
 
 0.724
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.