STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
babam1BRISC and BRCA1 A complex member 1. (378 aa)    
Predicted Functional Partners:
brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.999
babam2
BRISC and BRCA1 A complex member 2.
    
 0.999
ENSSPAP00000003143
Uncharacterized protein.
    
 0.996
abraxas2
Abraxas 2, BRISC complex subunit.
    
 0.995
brca1
Uncharacterized protein.
    
 0.991
ENSSPAP00000026219
Ig-like domain-containing protein.
    
 0.991
ENSSPAP00000017869
Reverse transcriptase domain-containing protein.
    
 0.986
bard1
BRCA1 associated RING domain 1.
    
 0.982
ENSSPAP00000012666
Uncharacterized protein.
    
 0.981
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.956
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.