STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103356101Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
LOC103362230
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 0.956
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.921
LOC103369329
TNF receptor-associated factor.
    
 0.921
LOC103369525
ADP-ribosylation factor 2b.
   
 0.908
LOC103374229
Mitogen-activated protein kinase kinase kinase 14a.
   
 0.908
LOC103370178
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.884
LOC103376579
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 0.883
LOC103370644
CD40 molecule, TNF receptor superfamily member 5.
  
  
0.850
traf2
TNF receptor-associated factor.
    
 0.848
LOC103375254
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.848
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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