STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366111Uncharacterized protein. (1155 aa)    
Predicted Functional Partners:
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.979
eaf1
ELL associated factor 1.
    
 0.957
mllt3
MLLT3 super elongation complex subunit.
    
 0.913
mllt1
MLLT1 super elongation complex subunit a.
    
 0.913
ak9
Adenylate kinase 9.
    
  0.870
ccnt2
Cyclin T2; Belongs to the cyclin family.
   
 0.868
LOC103367749
Cyclin T2b; Belongs to the cyclin family.
   
 0.868
ccnt1
Cyclin T1; Belongs to the cyclin family.
   
 0.868
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.853
ell2
Elongation factor, RNA polymerase II, 2.
   
 0.850
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.