STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000005193Uncharacterized protein. (463 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.747
tk1
Thymidine kinase.
    
  0.730
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.717
LOC103376304
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.594
ENSSPAP00000002342
Gp_dh_N domain-containing protein.
    
 0.594
ENSSPAP00000008864
Gp_dh_N domain-containing protein.
    
 0.594
LOC103356842
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.594
LOC103369915
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.594
ENSSPAP00000004797
NDK domain-containing protein.
    
  0.568
LOC103375127
Glucuronokinase with putative uridyl pyrophosphorylase.
  
 
  0.545
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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