STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrp1Tyrosinase related protein 1. (521 aa)    
Predicted Functional Partners:
TYR
Tyrosinase.
  
0.969
dct
Dopachrome tautomerase.
  
 
 
0.867
LOC103353170
Tyrosinase-related protein 1b.
  
 
 
0.855
got2
Aspartate aminotransferase.
    
 0.838
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
 0.812
hdc
Histidine decarboxylase.
    
  0.767
ENSSPAP00000028059
Dopa decarboxylase.
    
  0.767
LOC103357664
Glutamic-oxaloacetic transaminase 1 like 1.
    
  0.683
got1
Aspartate aminotransferase.
    
  0.683
GOT1
Aspartate aminotransferase.
    
  0.683
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.