STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358294SEC7 domain-containing protein. (822 aa)    
Predicted Functional Partners:
ENSSPAP00000001979
ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited).
 
   
  0.935
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
0.717
LOC103356696
Cytohesin 4b.
    
0.632
cyth2
Cytohesin 2.
    
0.581
cyth1
Cytohesin 1a.
    
0.581
LOC103373539
Uncharacterized protein.
    
0.581
LOC103367828
Cytohesin 1b.
    
0.581
cyth3
Cytohesin 3.
    
0.581
LOC103373443
Cytohesin 4a.
    
 0.568
LOC103375846
SEC7 domain-containing protein.
    
0.568
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.