STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000005414Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
rere
Arginine-glutamic acid dipeptide (RE) repeats a.
 
      0.900
LOC103359860
Arginine-glutamic acid dipeptide (RE) repeats b.
 
      0.900
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
  0.789
LOC103353178
Recombination signal binding protein for immunoglobulin kappa J region a.
    
  0.789
LOC103360593
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
  0.789
fat2
FAT atypical cadherin 2.
    
 0.779
fat1
FAT atypical cadherin 1a.
    
 0.779
LOC103354503
FAT atypical cadherin 3b.
    
 0.716
fat3
FAT atypical cadherin 3a.
    
 0.716
ep300
E1A binding protein p300 b.
   
 0.645
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.