STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373294TIMP metallopeptidase inhibitor 2b. (220 aa)    
Predicted Functional Partners:
mmp9
Matrix metallopeptidase 9.
   
 0.949
mmp15
Matrix metallopeptidase 15b.
   
 0.938
LOC103360306
Matrix metallopeptidase 14b (membrane-inserted).
   
 0.938
LOC103370039
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
    
 0.791
mmp13
Matrix metallopeptidase 13b.
   
 0.790
LOC103357223
Matrix metallopeptidase 20a (enamelysin).
   
 0.790
LOC103357224
Matrix metallopeptidase 20b (enamelysin).
   
 0.789
LOC103357222
ZnMc domain-containing protein.
   
 0.789
mmp2
Matrix metallopeptidase 2.
   
 0.789
LOC103370389
ZnMc domain-containing protein.
   
 0.789
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.