STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000005561Metalloendopeptidase. (997 aa)    
Predicted Functional Partners:
chrd
Chordin; Belongs to the chordin family.
   
 
 0.927
LOC103372445
Procollagen C-endopeptidase enhancer b.
   
0.714
pcolce2
Procollagen C-endopeptidase enhancer 2b.
   
0.714
LOC103363028
Procollagen C-endopeptidase enhancer a.
   
0.714
manf
Mesencephalic astrocyte-derived neurotrophic factor.
 
    
 0.623
col1a1
Collagen, type I, alpha 1a.
    
 0.579
prcp
Prolylcarboxypeptidase (angiotensinase C).
     
 0.579
LOC103372024
Collagen, type I, alpha 1b.
    
 0.579
dpp7
Dipeptidyl-peptidase 7.
     
 0.579
ace
Angiotensin-converting enzyme; Belongs to the peptidase M2 family.
   
 
 0.570
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.