STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354479Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
parva
Parvin, alpha a.
   
 0.992
parvb
Parvin, beta.
   
 0.992
parvg
Parvin, gamma.
   
 0.990
LOC103352838
LIM domain-containing protein.
   
 0.975
LOC103353988
LIM domain-containing protein.
   
 0.975
LOC103366908
Uncharacterized protein.
   
 0.952
pxn
Uncharacterized protein.
   
 0.952
rsu1
Ras suppressor protein 1.
   
 0.946
LOC103356033
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.945
akt2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
0.945
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.