STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jmjd7Jumonji domain containing 7. (337 aa)    
Predicted Functional Partners:
pla2g7
Platelet-activating factor acetylhydrolase.
     
 0.892
LOC103366536
Uncharacterized protein.
   
 
 0.855
pla2g15
Phospholipase A2, group XV.
     
 0.852
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.851
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.844
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
     
 0.843
LOC103374189
LRAT domain-containing protein.
     
 0.842
lcat
Lecithin-cholesterol acyltransferase.
     
 0.841
pla2g4a
Phospholipase A2.
 
   
 0.840
GNAZ
G protein subunit alpha z.
    
  0.838
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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