ENSSPAP00000005642 protein (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSPAP00000005642

Tyrosine-protein phosphatase domain-containing protein. (102 aa)

Predicted Functional Partners:

tnn

0.776

ENSSPAP00000007814

0.776

met

0.776

tnr

0.776

ENSSPAP00000023532

0.776

LOC103374965

0.776

LOC103360420

0.776

LOC103356464

0.776

mst1r

0.776

ctnnb1

0.762

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000005642	ENSSPAP00000007814	ENSSPAP00000005642	ENSSPAP00000007814	Tyrosine-protein phosphatase domain-containing protein.	Uncharacterized protein.	0.776
ENSSPAP00000005642	ENSSPAP00000023532	ENSSPAP00000005642	ENSSPAP00000023532	Tyrosine-protein phosphatase domain-containing protein.	Macrophage stimulating 1 receptor b.	0.776
ENSSPAP00000005642	LOC103356464	ENSSPAP00000005642	ENSSPAP00000027792	Tyrosine-protein phosphatase domain-containing protein.	Tenascin C.	0.776
ENSSPAP00000005642	LOC103360420	ENSSPAP00000005642	ENSSPAP00000026271	Tyrosine-protein phosphatase domain-containing protein.	Macrophage stimulating 1 receptor a.	0.776
ENSSPAP00000005642	LOC103374965	ENSSPAP00000005642	ENSSPAP00000023698	Tyrosine-protein phosphatase domain-containing protein.	Zmp:0000000846.	0.776
ENSSPAP00000005642	ctnnb1	ENSSPAP00000005642	ENSSPAP00000015579	Tyrosine-protein phosphatase domain-containing protein.	Catenin (cadherin-associated protein), beta 1.	0.762
ENSSPAP00000005642	met	ENSSPAP00000005642	ENSSPAP00000011549	Tyrosine-protein phosphatase domain-containing protein.	MET proto-oncogene, receptor tyrosine kinase.	0.776
ENSSPAP00000005642	mst1r	ENSSPAP00000005642	ENSSPAP00000028964	Tyrosine-protein phosphatase domain-containing protein.	Macrophage stimulating 1 receptor b.	0.776
ENSSPAP00000005642	tnn	ENSSPAP00000005642	ENSSPAP00000000957	Tyrosine-protein phosphatase domain-containing protein.	Tenascin N.	0.776
ENSSPAP00000005642	tnr	ENSSPAP00000005642	ENSSPAP00000012487	Tyrosine-protein phosphatase domain-containing protein.	Tenascin R (restrictin, janusin).	0.776
ENSSPAP00000007814	ENSSPAP00000005642	ENSSPAP00000007814	ENSSPAP00000005642	Uncharacterized protein.	Tyrosine-protein phosphatase domain-containing protein.	0.776
ENSSPAP00000007814	ENSSPAP00000023532	ENSSPAP00000007814	ENSSPAP00000023532	Uncharacterized protein.	Macrophage stimulating 1 receptor b.	0.673
ENSSPAP00000007814	LOC103356464	ENSSPAP00000007814	ENSSPAP00000027792	Uncharacterized protein.	Tenascin C.	0.798
ENSSPAP00000007814	LOC103360420	ENSSPAP00000007814	ENSSPAP00000026271	Uncharacterized protein.	Macrophage stimulating 1 receptor a.	0.673
ENSSPAP00000007814	LOC103374965	ENSSPAP00000007814	ENSSPAP00000023698	Uncharacterized protein.	Zmp:0000000846.	0.798
ENSSPAP00000007814	met	ENSSPAP00000007814	ENSSPAP00000011549	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.673
ENSSPAP00000007814	mst1r	ENSSPAP00000007814	ENSSPAP00000028964	Uncharacterized protein.	Macrophage stimulating 1 receptor b.	0.673
ENSSPAP00000007814	tnn	ENSSPAP00000007814	ENSSPAP00000000957	Uncharacterized protein.	Tenascin N.	0.798
ENSSPAP00000007814	tnr	ENSSPAP00000007814	ENSSPAP00000012487	Uncharacterized protein.	Tenascin R (restrictin, janusin).	0.798
ENSSPAP00000023532	ENSSPAP00000005642	ENSSPAP00000023532	ENSSPAP00000005642	Macrophage stimulating 1 receptor b.	Tyrosine-protein phosphatase domain-containing protein.	0.776