STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lap3Leucine aminopeptidase 3. (517 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 0.932
GGT7
Gamma-glutamyltransferase 7.
    
 0.911
LOC103366108
Uncharacterized protein.
    
 0.911
LOC103366101
Gamma-glutamyltransferase 1b.
    
 0.911
ggt5
Gamma-glutamyltransferase 5a.
    
 0.911
ggt1
Gamma-glutamyltransferase 1a.
    
 0.911
LOC103374894
Uncharacterized protein.
    
 0.911
gclm
Glutamate-cysteine ligase, modifier subunit.
   
  0.908
LOC103357664
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.906
gss
Glutathione synthetase.
     
 0.906
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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