STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c1qtnf5C1q and TNF related 5. (250 aa)    
Predicted Functional Partners:
ENSSPAP00000018005
Membrane frizzled-related protein.
 
  
 
 0.714
LOC103362141
C1q and TNF related 9.
  
 
  
0.620
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
      
 0.420
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
      
 0.420
dhfr
Dihydrofolate reductase.
      
 0.416
LOC103371587
Dihydrofolate reductase.
      
 0.416
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.