STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103361068Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family. (260 aa)    
Predicted Functional Partners:
LOC103365693
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.977
LOC103374359
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.977
sqle
Squalene epoxidase a.
   
 0.977
LOC103368973
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
0.958
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.958
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.950
LOC103357432
Cytochrome P450, family 46, subfamily A, polypeptide 1, tandem duplicate 4.
  
 0.941
dhcr7
7-dehydrocholesterol reductase.
   
 0.941
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.926
lbr
Lamin B receptor.
   
 0.926
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.