STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103367237Proteolipid protein 1b. (257 aa)    
Predicted Functional Partners:
mbp
Myelin basic protein b.
   
 
 0.791
LOC103371682
Myelin basic protein a.
   
  
 0.616
ENSSPAP00000028444
Uncharacterized protein.
   
 
 0.556
plp2
Proteolipid protein 2.
   
 
 0.524
mpz
Myelin protein zero.
   
  
 0.509
LOC103372274
Flj13639.
   
  
 0.458
LOC103372465
Protein tyrosine phosphatase receptor type Z1a.
   
 
 0.451
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
   
  
 0.434
LOC103360204
S100 calcium binding protein, beta (neural).
   
  
 0.413
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.