STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103367853Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)    
Predicted Functional Partners:
LOC103362787
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.976
LOC103362717
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.976
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.976
LOC103368437
Rhodopsin.
   
 0.955
LOC103360080
Rhodopsin.
   
 0.952
LOC103360090
Rhodopsin.
   
 0.952
RHO
Rhodopsin.
   
 0.952
pde6a
Phosphodiesterase.
   
 0.943
LOC103352804
Regulator of G protein signaling 9b.
   
 0.939
rgs11
Regulator of G protein signaling 11.
   
 0.939
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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