STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362813RNA binding motif protein 10. (789 aa)    
Predicted Functional Partners:
ddx10
RNA helicase.
    
 0.845
SUGP1
SURP and G-patch domain containing 1.
   
 0.843
nol6
Nucleolar protein 6.
   
 
 0.799
utp6
UTP6 small subunit processome component.
    
 
 0.791
bysl
Bystin-like.
    
 
 0.788
nom1
Nucleolar protein with MIF4G domain 1.
   
   0.784
rrp36
Ribosomal RNA processing 36.
   
   0.784
utp25
UTP25 small subunit processor component.
    
   0.782
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
    
   0.782
nop14
NOP14 nucleolar protein homolog (yeast).
    
   0.782
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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