STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx6Sorting nexin; Involved in several stages of intracellular trafficking. (407 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
   
 0.966
LOC103366729
Sorting nexin 1a.
   
0.946
ENSSPAP00000022284
Sorting nexin 1b.
   
0.946
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
  
  
0.923
LOC103361951
PX domain-containing protein.
   
 0.847
LOC103356774
Sorting nexin 4.
   
 0.847
snx8
Sorting nexin 8a.
   
 0.839
ENSSPAP00000003977
Uncharacterized protein.
     
 0.815
snx30
Sorting nexin family member 30.
   
 0.792
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
   
 0.792
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.