STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abca12ATP-binding cassette, sub-family A (ABC1), member 12. (4355 aa)    
Predicted Functional Partners:
LOC103354135
Uncharacterized protein.
    
 0.640
LOC103354136
Uncharacterized protein.
    
 0.640
LOC103357730
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.639
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.632
apoa4
Uncharacterized protein.
    
 0.631
LOC103355445
2-epi-5-epi-valiolone synthase.
     
 0.615
abcc2
Uncharacterized protein.
  
 0.600
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
   
 
  0.574
abcc10
ATP-binding cassette, sub-family C (CFTR/MRP), member 10.
  
0.560
LOC103363446
ATP-binding cassette, sub-family C (CFTR/MRP), member 1.
  
0.558
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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