STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jcadJunctional cadherin 5 associated a. (1656 aa)    
Predicted Functional Partners:
LOC103360193
Uncharacterized protein.
  
     0.499
LOC103362776
Methyl-CpG binding domain protein 6.
  
     0.493
bicral
BRD4 interacting chromatin remodeling complex associated protein like.
  
     0.470
znf469
Uncharacterized protein.
  
     0.423
LOC103359794
FAM83 domain-containing protein.
  
     0.420
ENSSPAP00000017365
Uncharacterized protein.
  
     0.417
ZBTB45
Uncharacterized protein.
  
     0.413
LOC103363229
Prospero homeobox 3.
  
     0.409
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.