STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ammecr1AMMECR1 domain-containing protein. (334 aa)    
Predicted Functional Partners:
memo1
Mediator of cell motility 1.
  
    0.803
naxe
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
  
 0.522
yjefn3
YjeF N-terminal domain containing 3.
  
  
 0.522
neil3
Nei-like DNA glycosylase 3.
      
 0.516
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.480
pdzd11
PDZ domain containing 11.
    
 
 0.463
zc3h14
Zinc finger CCCH-type containing 14.
    
 
 0.449
pggt1b
Protein geranylgeranyltransferase type I, beta subunit.
    
   0.446
sh3bgrl
SH3 domain binding glutamate-rich protein like.
   
  
 0.434
LOC103375937
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
  
  
 0.413
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.