STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pofut2Protein O-fucosyltransferase 2. (445 aa)    
Predicted Functional Partners:
pofut1
Protein O-fucosyltransferase 1.
     
0.952
spon1
Uncharacterized protein.
     
 0.688
ENSSPAP00000006242
Spondin 1a.
     
 0.688
LOC103368646
Spondin 1a.
     
 0.688
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
 0.685
adamtsl5
ADAMTS like 5.
     
 0.662
adamts8
ADAM metallopeptidase with thrombospondin type 1 motif, 15b.
     
 0.649
ENSSPAP00000015897
Uncharacterized protein.
     
 0.648
ENSSPAP00000015962
Uncharacterized protein.
     
 0.648
ENSSPAP00000021363
Uncharacterized protein.
     
 0.648
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.