STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374601RAB33B, member RAS oncogene family a. (240 aa)    
Predicted Functional Partners:
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
 0.992
LOC103361834
WD_REPEATS_REGION domain-containing protein.
    
 0.986
LOC103357227
Zgc:101559.
  
  
 
0.900
LOC103375295
Uncharacterized protein.
  
  
 
0.900
rab33a
RAB33A, member RAS oncogene family.
  
 
 
0.884
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.882
tbc1d25
TBC1 domain family, member 25.
     
 0.880
ENSSPAP00000008084
Uncharacterized protein.
    
 0.865
trappc2
Trafficking protein particle complex 2.
    
 0.864
trappc8
Trafficking protein particle complex 8.
    
 0.857
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.