STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357222ZnMc domain-containing protein. (480 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.840
pla2g4a
Phospholipase A2.
   
 
  0.794
LOC103373294
TIMP metallopeptidase inhibitor 2b.
   
 0.789
LOC103367827
NTR domain-containing protein.
   
 0.789
mmp14
Matrix metallopeptidase 14a (membrane-inserted).
  
0.701
mmp9
Matrix metallopeptidase 9.
   
0.686
hbegf
Heparin-binding EGF-like growth factor a.
    
  0.656
TIMP4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.650
ENSSPAP00000012851
Uncharacterized protein.
     
 0.642
LOC103373710
Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family.
     
 0.642
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.