STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000006310Si:ch211-1o7.2. (170 aa)    
Predicted Functional Partners:
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
birc6
Baculoviral IAP repeat containing 6.
   
 0.615
LOC103366525
Uncharacterized protein.
  
 
  0.610
gak
Cyclin G associated kinase.
   
 0.609
pla2g4a
Phospholipase A2.
    
 0.600
ankrd2
Ankyrin repeat domain 2 (stretch responsive muscle).
  
 
  0.599
cdkn2d
Cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4).
  
 
  0.597
traf7
TNF receptor-associated factor 7.
    
  0.595
LOC103367966
Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.
  
 
  0.591
LOC103354452
Ankyrin repeat and SOCS box containing 14b.
  
 
  0.585
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.