STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd8Major facilitator superfamily domain containing 8. (507 aa)    
Predicted Functional Partners:
mpl
MPL proto-oncogene, thrombopoietin receptor.
    
 0.815
epor
Erythropoietin receptor.
     
 0.752
psmd3
Proteasome 26S subunit, non-ATPase 3.
     
 0.733
il7r
Fibronectin type-III domain-containing protein.
    
 0.721
LOC103371043
Uncharacterized protein.
     
 0.701
lepr
Leptin receptor.
     
 0.693
cln3
Battenin.
    
 
 0.606
cln8
CLN8 transmembrane ER and ERGIC protein.
      
 0.549
cln5
CLN5 intracellular trafficking protein.
      
 0.529
cln6
CLN6 transmembrane ER protein a.
      
 0.529
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.