STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000006556Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
nphp1
Nephronophthisis 1.
   
 0.968
rpgrip1l
RPGRIP1 like.
    
 0.952
ENSSPAP00000006528
Uncharacterized protein.
 
      0.849
LOC103371140
Uncharacterized protein.
    
 0.782
fmnl2
Formin-like 2a.
    
 0.782
ENSSPAP00000014457
Uncharacterized protein.
    
 0.782
LOC103374236
Formin-like 1a.
    
 0.782
ENSSPAP00000029965
Formin-like 3.
    
 0.782
lats2
Large tumor suppressor kinase 2.
    
 0.742
lats1
Large tumor suppressor kinase 1.
    
 0.742
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.