STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353397Galectin. (348 aa)    
Predicted Functional Partners:
LOC103369871
Ig-like domain-containing protein.
    
 0.887
usp18
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
  
 0.776
ptprc
Protein tyrosine phosphatase receptor type C.
   
 
 0.650
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.650
LOC103367548
Uncharacterized protein.
    
 0.647
cd44
CD44 molecule (Indian blood group) b.
   
 
 0.631
lag3
Uncharacterized protein.
    
 0.604
pbk
PDZ binding kinase.
    
   0.589
ENSSPAP00000015487
Ig-like domain-containing protein.
   
 0.569
ENSSPAP00000015545
Ig-like domain-containing protein.
   
 0.569
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.