STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366157Uncharacterized protein. (475 aa)    
Predicted Functional Partners:
LOC103359365
Solute carrier family 11 member 2.
  
  
 
0.899
catip
Ciliogenesis associated TTC17 interacting protein.
     
 0.662
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.623
atp13a1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 0.577
ndfip2
Nedd4 family interacting protein 2.
   
 
 0.554
ndfip1
Nedd4 family interacting protein 1, like.
   
 
 0.554
LOC103359140
Uncharacterized protein.
   
 
 0.554
atp7a
ATPase copper transporting alpha.
  
 
 0.537
LOC103365973
ATPase copper transporting beta.
  
 
 0.537
ccs
Copper chaperone for superoxide dismutase.
     
 0.533
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.