STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecdEcdysoneless homolog (Drosophila). (667 aa)    
Predicted Functional Partners:
LOC103372053
AAR2 splicing factor.
    
 
 0.927
LOC103376173
AAR2 splicing factor.
    
 
 0.927
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.916
prpf8
Pre-mRNA processing factor 8.
    
 
 0.907
ENSSPAP00000016672
Uncharacterized protein.
    
 
 0.893
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.817
eapp
E2f-associated phosphoprotein.
    
   0.802
ascc3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.732
znhit2
Zinc finger, HIT-type containing 2.
    
 
 0.730
hfm1
Helicase for meiosis 1.
   
 
 0.726
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.