STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neu1Neuraminidase 1. (385 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
    
 0.917
gla
Alpha-galactosidase.
     
 0.915
neu3
Sialidase 3 (membrane sialidase), tandem duplicate 1.
  
  
0.903
glb1
Beta-galactosidase.
  
 0.902
neu4
Sialidase 4.
  
  
0.902
galc
Galactosylceramidase b.
     
 0.901
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 0.900
ercc3
Excision repair cross-complementation group 3.
  
    0.884
naga
Alpha-galactosidase.
     
 0.866
LOC103353773
Sialidase domain-containing protein.
  
  
0.841
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.