STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374057Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b. (268 aa)    
Predicted Functional Partners:
LOC103373748
RRM domain-containing protein.
     
 0.728
rbm47
RNA binding motif protein 47.
     
 0.711
aicda
Activation-induced cytidine deaminase.
     
0.603
LOC103363874
Myosin, light chain 1, alkali; skeletal, fast.
   
    0.600
ada
Adenosine deaminase.
   
  
 0.543
LOC103369403
Synaptotagmin binding, cytoplasmic RNA interacting protein.
     
 0.484
hnrnpr
Heterogeneous nuclear ribonucleoprotein R.
     
 0.484
ENSSPAP00000018165
RNA binding motif protein 46.
     
 0.484
syncrip
Synaptotagmin binding, cytoplasmic RNA interacting protein, like.
     
 0.484
LOC103363223
DND microRNA-mediated repression inhibitor 1.
     
 0.484
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.